### Biography

James Gleeson holds a BSc in Mathematical Science and an MSc in Mathematical Physics from University College Dublin. In 1999 he completed his PhD in Applied Mathematics at Caltech. He has lectured at Arizona State University and at University College Cork, and since 2007 has held a Chair in Industrial and Applied Mathematics at the University of Limerick.

James' research interests are in mathematical modelling of stochastic dynamics, with a particular focus on complex systems and networks. He is a SEES co-PI, has held three Principal Investigator awards from Science Foundation Ireland, and is a co-PI on a Future and Emerging Technologies project funded by the European Commission's FP7. James is co-director of MACSI, the Mathematics Applications Consortium for Science and Industry (http://www.macsi.ul.ie/). MACSI researchers develop and apply mathematical techniques to assist collaborators from science and industry in solving real-world problems.

### Research Interests

My group works on mathematical models for stochastic dynamics, particularly on complex networks. As co-director of MACSI, I am also interested in applying mathematical tools and techniques to solving real-world problems, in collaboration with partners from industry, science and engineering. Our research is funded by Science Foundation Ireland and, as part of the PLEXMATH project, by the FET-Proactive scheme of the European Commission's FP7. My Google Scholar page is here.

### Publications

#### Books

Dynamical Systems on Networks: A Tutorial

Mason A. Porter and James P. Gleeson

(2016)
Dynamical Systems on Networks: A Tutorial

Switzerland :
Springer

#### Book Chapters

Message-Passing Methods for Complex Contagions

Gleeson, JP;Porter, MA

(2018)
Message-Passing Methods for Complex Contagions

* In COMPLEX SPREADING PHENOMENA IN SOCIAL SYSTEMS: INFLUENCE AND CONTAGION IN REAL-WORLD SOCIAL NETWORKS;*
BERLIN :
SPRINGER-VERLAG BERLIN
pp. 81-95

**DOI:** 10.1007/978-3-319-77332-2_5

Systemic Risk in Banking Networks Without Monte Carlo Simulation

James P. Gleeson, T.R. Hurd, Sergey Melnik, Adam Hackett

(2012)
Systemic Risk in Banking Networks Without Monte Carlo Simulation

* In Advances in Network Analysis and its Applications;*
Berlin :
Springer
pp. 27-56

**DOI:** 10.1007/978-3-642-30904-5

#### Peer Reviewed Journals

Multistate Dynamical Processes on Networks: Analysis through Degree-Based Approximation Frameworks

Fennell, PG;Gleeson, JP

(2019)
Multistate Dynamical Processes on Networks: Analysis through Degree-Based Approximation Frameworks

* In Siam Review;*
PHILADELPHIA :
SIAM PUBLICATIONS
pp. 92-118

**DOI:** 10.1137/16M1109345

[ULIR]

Sparse Power-Law Network Model for Reliable Statistical Predictions Based on Sampled Data

Kartun-Giles, AP;Krioukov, D;Gleeson, JP;Moreno, Y;Bianconi, G

(2018)
Sparse Power-Law Network Model for Reliable Statistical Predictions Based on Sampled Data

* In Entropy;*
BASEL :
MDPI

**DOI:** 10.3390/e20040257

[ULIR]

A framework for analyzing contagion in assortative banking networks

Hurd, TR,Gleeson, JP,Melnik, S

(2017)
A framework for analyzing contagion in assortative banking networks

* In Plos One;*

**DOI:** 10.1371/journal.pone.0170579

[ULIR]

Equivalence between Non-Markovian and Markovian Dynamics in Epidemic Spreading Processes

Starnini, M,Gleeson, JP,Boguna, M

(2017)
Equivalence between Non-Markovian and Markovian Dynamics in Epidemic Spreading Processes

* In Physical Review Letters;*

**DOI:** 10.1103/PhysRevLett.118.128301

[ULIR]

Specifying An Efficient Renewable Energy Feed-in Tariff

Farrell, N,Devine, MT,Lee, WT,Gleeson, JP,Lyons, S

(2017)
Specifying An Efficient Renewable Energy Feed-in Tariff

* In Energy Journal;*
pp. 53-75

**DOI:** 10.5547/01956574.38.2.nfar

Concurrency-Induced Transitions in Epidemic Dynamics on Temporal Networks

Onaga, T,Gleeson, JP,Masuda, N

(2017)
Concurrency-Induced Transitions in Epidemic Dynamics on Temporal Networks

* In Physical Review Letters;*

**DOI:** 10.1103/PhysRevLett.119.108301

[ULIR]

Integrating sentiment and social structure to determine preference alignments: the Irish Marriage Referendum

O'Sullivan, DJP,Garduno-Hernandez, G,Gleeson, JP,Beguerisse-Diaz, M

(2017)
Integrating sentiment and social structure to determine preference alignments: the Irish Marriage Referendum

* In Royal Society Open Science;*

**DOI:** 10.1098/rsos.170154

[ULIR]

Temporal profiles of avalanches on networks

Gleeson, JP,Durrett, R

(2017)
Temporal profiles of avalanches on networks

* In Nature Communications;*

**DOI:** 10.1038/s41467-017-01212-0

[ULIR]

Effects of Network Structure, Competition and Memory Time on Social Spreading Phenomena

Gleeson, JP,O'Sullivan, KP,Banos, RA,Moreno, Y

(2016)
Effects of Network Structure, Competition and Memory Time on Social Spreading Phenomena

* In Physical Review X;*

**DOI:** 10.1103/PhysRevX.6.021019

[ULIR]

Emergence of coexisting percolating clusters in networks

Faqeeh, A; Melnik, S; Colomer-de-Simón, P; Gleeson, JP

(2016)
Emergence of coexisting percolating clusters in networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.93.062308

Bond Percolation on Multiplex Networks

Hackett, A,Cellai, D,Gomez, S,Arenas, A,Gleeson, JP

(2016)
Bond Percolation on Multiplex Networks

* In Physical Review X;*

**DOI:** 10.1103/PhysRevX.6.021002

[ULIR]

Limitations of discrete-time approaches to continuous-time contagion dynamics

Fennell, PG,Melnik, S,Gleeson, JP

(2016)
Limitations of discrete-time approaches to continuous-time contagion dynamics

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.94.052125

[ULIR]

Emergence of coexisting percolating clusters in networks

Faqeeh, A,Melnik, S,Colomer-de-Simon, P,Gleeson, JP

(2016)
Emergence of coexisting percolating clusters in networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.93.062308

[ULIR]

Mathematical modeling of complex contagion on clustered networks

O'Sullivan, DJP,O'Keeffe, GJ,Fennell, PG,Gleeson, JP

(2015)
Mathematical modeling of complex contagion on clustered networks

* In Frontiers In Physics;*

**DOI:** 10.3389/fphy.2015.00071

Network cloning unfolds the effect of clustering on dynamical processes

Faqeeh, A; Melnik, S; Gleeson, JP

(2015)
Network cloning unfolds the effect of clustering on dynamical processes

* In Physical Review E;*
pp. 052807-

**DOI:** 10.1103/PhysRevE.91.052807

Competition-Induced Criticality in a Model of Meme Popularity

Gleeson, JP,Ward, JA,O'Sullivan, KP,Lee, WT

(2014)
Competition-Induced Criticality in a Model of Meme Popularity

* In Physical Review Letters;*

**DOI:** 10.1103/PhysRevLett.112.048701

[ULIR]

A Rolling Optimisation Model of the UK Natural Gas Market

Devine, MT,Gleeson, JP,Kinsella, J,Ramsey, DM

(2014)
A Rolling Optimisation Model of the UK Natural Gas Market

* In Networks & Spatial Economics;*
pp. 209-244

**DOI:** 10.1007/s11067-013-9216-4

Dynamics on modular networks with heterogeneous correlations

Melnik, S,Porter, MA,Mucha, PJ,Gleeson, JP

(2014)
Dynamics on modular networks with heterogeneous correlations

* In Chaos;*

**DOI:** 10.1063/1.4869983

[ULIR]

A simple generative model of collective online behavior

Gleeson, JP,Cellai, D,Onnela, JP,Porter, MA,Reed-Tsochas, F

(2014)
A simple generative model of collective online behavior

* In Proceedings of the National Academy of Sciences of the United States of America;*
pp. 10411-10415

**DOI:** 10.1073/pnas.1313895111

Analytical approach to the dynamics of facilitated spin models on random networks

Fennell, PG,Gleeson, JP,Cellai, D

(2014)
Analytical approach to the dynamics of facilitated spin models on random networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.90.032824

[ULIR]

Percolation in multiplex networks with overlap

Cellai, D,Lopez, E,Zhou, J,Gleeson, JP,Bianconi, G

(2013)
Percolation in multiplex networks with overlap

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.88.052811

[ULIR]

Cascades on clique-based graphs

Hackett, A,Gleeson, JP

(2013)
Cascades on clique-based graphs

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.87.062801

[ULIR]

Critical phenomena in heterogeneous k-core percolation

Cellai, D,Lawlor, A,Dawson, KA,Gleeson, JP

(2013)
Critical phenomena in heterogeneous k-core percolation

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.87.022134

[ULIR]

Binary-State Dynamics on Complex Networks: Pair Approximation and Beyond

Gleeson, JP

(2013)
Binary-State Dynamics on Complex Networks: Pair Approximation and Beyond

* In Physical Review X;*

**DOI:** 10.1103/PhysRevX.3.021004

[ULIR]

Multi-stage complex contagions

Melnik, S,Ward, JA,Gleeson, JP,Porter, MA

(2013)
Multi-stage complex contagions

* In Chaos;*

**DOI:** 10.1063/1.4790836

[ULIR]

Variability in output torque of capstan and wrap spring elements

Cronin, K,Gleeson, JP

(2013)
Variability in output torque of capstan and wrap spring elements

* In Mechanism And Machine Theory;*
pp. 49-66

**DOI:** 10.1016/j.mechmachthecny.2013.04.014

Statistical characterisation and modelling of random geometric imperfections in cylindrical shells

de Paor, C,Cronin, K,Gleeson, JP,Kelliher, D

(2012)
Statistical characterisation and modelling of random geometric imperfections in cylindrical shells

* In Thin-Walled Structures;*
pp. 9-17

**DOI:** 10.1016/j.tws.2012.04.004

Graph fission in an evolving voter model

Durrett, R,Gleeson, JP,Lloyd, AL,Mucha, PJ,Shi, F,Sivakoff, D,Socolar, JES,Varghese, C

(2012)
Graph fission in an evolving voter model

* In Proceedings Of The National Academy Of Sciences Of The United States Of America;*
pp. 3682-3687

**DOI:** 10.1073/pnas.1200709109

Accuracy of mean-field theory for dynamics on real-world networks

Gleeson, JP,Melnik, S,Ward, JA,Porter, MA,Mucha, PJ

(2012)
Accuracy of mean-field theory for dynamics on real-world networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.85.026106

[ULIR]

Cascades on a class of clustered random networks

Hackett, A; Melnik, S; Gleeson, JP

(2011)
Cascades on a class of clustered random networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.83.056107

[ULIR]

Tricritical Point in Heterogeneous k-Core Percolation

Cellai, D; Lawlor, A; Dawson, KA; Gleeson, JP

(2011)
Tricritical Point in Heterogeneous k-Core Percolation

* In Physical Review Letters;*

**DOI:** 10.1103/PhysRevLett.107.175703

[ULIR]

The unreasonable effectiveness of tree-based theory for networks with clustering

Melnik, S; Hackett, A; Porter, MA; Mucha, PJ; Gleeson, JP

(2011)
The unreasonable effectiveness of tree-based theory for networks with clustering

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.83.036112

[ULIR]

High-Accuracy Approximation of Binary-State Dynamics on Networks

Gleeson, JP

(2011)
High-Accuracy Approximation of Binary-State Dynamics on Networks

* In Physical Review Letters;*

**DOI:** 10.1103/PhysRevLett.107.068701

[ULIR]

Binary Phase Detector Gain in Bang-Bang Phase-Locked Loops With DCO Jitter

Tertinek, S; Gleeson, JP; Feely, O

(2010)
Binary Phase Detector Gain in Bang-Bang Phase-Locked Loops With DCO Jitter

* In Ieee Transactions On Circuits And Systems Ii-Express Briefs;*
pp. 941-945

**DOI:** 10.1109/TCSII.2010.2083110

How clustering affects the bond percolation threshold in complex networks

Gleeson, JP; Melnik, S; Hackett, A

(2010)
How clustering affects the bond percolation threshold in complex networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.81.066114

[ULIR]

Statistical Analysis of First-Order Bang-Bang Phase-Locked Loops Using Sign-Dependent Random-Walk Theory

Tertinek, S; Gleeson, JP; Feely, O

(2010)
Statistical Analysis of First-Order Bang-Bang Phase-Locked Loops Using Sign-Dependent Random-Walk Theory

* In Ieee Transactions On Circuits And Systems I-Regular Papers;*
pp. 2367-2380

**DOI:** 10.1109/TCSI.2010.2043016

Bond percolation on a class of clustered random networks

Gleeson, JP

(2009)
Bond percolation on a class of clustered random networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.80.036107

[ULIR]

Accuracy of whole-body low-dose multidetector CT (WBLDCT) versus skeletal survey in the detection of myelomatous lesions, and correlation of disease distribution with whole-body MRI (WBMRI)

Gleeson, TG; Moriarty, J; Shortt, CP; Gleeson, JP; Fitzpatrick, P; Byrne, B; McHugh, J; O'Connell, M; O'Gorman, P; Eustace, SJ

(2009)
Accuracy of whole-body low-dose multidetector CT (WBLDCT) versus skeletal survey in the detection of myelomatous lesions, and correlation of disease distribution with whole-body MRI (WBMRI)

* In Skeletal Radiology;*
pp. 225-236

**DOI:** 10.1007/s00256-008-0607-4

Diffusion coefficient in periodic and random potentials

Khoury, M; Gleeson, JP; Sancho, JM; Lacasta, AM; Lindenberg, K

(2009)
Diffusion coefficient in periodic and random potentials

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.80.021123

Analytical results for bond percolation and k-core sizes on clustered networks

Gleeson, JP; Melnik, S

(2009)
Analytical results for bond percolation and k-core sizes on clustered networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.80.046121

[ULIR]

On asymptotic stability and instability with respect to a fading stochastic perturbation

Appleby, JAD; Gleeson, JP; Rodkina, A

(2009)
On asymptotic stability and instability with respect to a fading stochastic perturbation

* In Applicable Analysis;*
pp. 579-603

**DOI:** 10.1080/00036810902913847

Study on the Combined Effects of Solvent Evaporation and Polymer Flow upon Block Copolymer Self-Assembly and Alignment on Topographic Patterns

Fitzgerald, TG; Farrell, RA; Petkov, N; Bolger, CT; Shaw, MT; Charpin, JPF; Gleeson, JP; Holmes, JD; Morris, MA

(2009)
Study on the Combined Effects of Solvent Evaporation and Polymer Flow upon Block Copolymer Self-Assembly and Alignment on Topographic Patterns

* In Langmuir;*
pp. 13551-13560

**DOI:** 10.1021/la9018162

Transport in randomly-fluctuating spatially-periodic potentials

Gleeson, JP

(2009)
Transport in randomly-fluctuating spatially-periodic potentials

* In Physica A-Statistical Mechanics And Its Applications;*
pp. 277-287

**DOI:** 10.1016/j.physa.2008.10.013

Mean size of avalanches on directed random networks with arbitrary degree distributions

Gleeson, JP

(2008)
Mean size of avalanches on directed random networks with arbitrary degree distributions

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.77.057101

[ULIR]

Cascades on correlated and modular random networks

Gleeson, JP

(2008)
Cascades on correlated and modular random networks

* In Physical Review E;*

**DOI:** 10.1103/PhysRevE.77.046117

Seed size strongly affects cascades on random networks

Gleeson, JP; Cahalane, DJ

(2007)
Seed size strongly affects cascades on random networks

* In Phys. Rev. E.;*
pp. 056103-

Kramers' law for a bistable system with time-delayed noise

Goulding, D; Melnik, S; Curtin, D; Gleeson, JP; et al

(2007)
Kramers' law for a bistable system with time-delayed noise

* In Physical Review E;*
pp. 031128-

[ULIR]

Fabrication of nanopore array electrodes by focused ion beam milling

Lanyon; YH; De Marzi, G; Watson, YE; Gleeson, JP; et al

(2007)
Fabrication of nanopore array electrodes by focused ion beam milling

* In Analytical Chemistry;*
pp. 3048-3055

Selection of processing temperature to minimize product temperature variability in food heating processes

Cronin, K; Mackey, D; Cregan, V; O'Brien, S; Gleeson, JP; Abodayeh, K

(2007)
Selection of processing temperature to minimize product temperature variability in food heating processes

* In Food And Bioproducts Processing;*
pp. 344-353

**DOI:** 10.1205/fbp07080

Phase diffusion coefficient for oscillators perturbed by colored noise

O'Doherty, F; Gleeson, JP

(2007)
Phase diffusion coefficient for oscillators perturbed by colored noise

* In Ieee Transactions On Circuits And Systems-Part 11;*
pp. 435-439

Role of interaction on noise-induced transport of two coupled particles in Brownian ratchet devices

Retkute, R; Gleeson, JP

(2006)
Role of interaction on noise-induced transport of two coupled particles in Brownian ratchet devices

* In Fluctuation And Noise Letters;*
pp. L263-L277

Applications of small-world network theory in alcohol epidemiology

Braun, RJ; Wilson, RA; Pelesko, JA; Gleeson, JP; et al

(2006)
Applications of small-world network theory in alcohol epidemiology

* In Journal Of Studies On Alcohol;*
pp. 591-599

Analytical approach to sorting in periodic and random potentials

Gleeson, JP; Sancho, JM; Lacasta, AM; et al

(2006)
Analytical approach to sorting in periodic and random potentials

* In Physical Review E;*
pp. 041102-

Non-Lorentzian spectral lineshapes near a Hopf bifurcation

Gleeson, JP; O'Doherty, F

(2006)
Non-Lorentzian spectral lineshapes near a Hopf bifurcation

* In S.I.A.M. Journal Of Applied Mathematics;*
pp. 1669-1688

The mean field of weakly coupled oscillators exhibits non-smooth phase noise

Gleeson, JP

(2006)
The mean field of weakly coupled oscillators exhibits non-smooth phase noise

* In Europhysics Letters;*
pp. 328-334

Phase diffusion due to low-frequency colored noise

Gleeson, JP

(2006)
Phase diffusion due to low-frequency colored noise

* In Ieee Transactions On Circuits And Systems-Part 11;*
pp. 183-186

Passive motion in dynamical disorder as a model for stock market prices

Gleeson, JP

(2005)
Passive motion in dynamical disorder as a model for stock market prices

* In Physica A;*
pp. 523-550

Exactly solvable model of continuous stationary 1/f noise

Gleeson, JP

(2005)
Exactly solvable model of continuous stationary 1/f noise

* In Physical Review E;*
pp. 011106-

Transient micromixing: Examples of laminar and chaotic stirring

Gleeson, JP

(2005)
Transient micromixing: Examples of laminar and chaotic stirring

* In Physics Of Fluids;*
pp. 100614-

Nonlinear sloshing and passage through resonance in a shallow water tank

Cox, EA; Gleeson, JP; Mortell, MP

(2005)
Nonlinear sloshing and passage through resonance in a shallow water tank

* In Zamp;*
pp. 645-680

Influence of noise intensity on the spectrum of an oscillator

Swain, RS; Gleeson, JP; Kennedy, MP

(2005)
Influence of noise intensity on the spectrum of an oscillator

* In Ieee Transactions On Circuits And Systems-Part 11;*
pp. 789-793

Modelling annular micromixers

Gleeson, JP; Roche, OM; West, J; et al

(2004)
Modelling annular micromixers

* In S.I.A.M. Journal Of Applied Mathematics;*
pp. 1294-1310

Structuring laminar flows using annular magnetohydrodynamic actuation

West, J; Gleeson, JP; Alderman, J; et al

(2003)
Structuring laminar flows using annular magnetohydrodynamic actuation

* In Sensors And Actuators B-Chemical;*
pp. 190-199

Flatness of tracer density profile produced by a point source in turbulence

Gleeson, JP; Pullin, DI

(2003)
Flatness of tracer density profile produced by a point source in turbulence

* In Physics Of Fluids;*
pp. 3546-3557

Application of magnetohydrodynamic actuation to continuous flow chemistry

West, J; Karamata, B; Lillis, B; Gleeson, JP; et al

(2002)
Application of magnetohydrodynamic actuation to continuous flow chemistry

* In Lab On A Chip;*
pp. 224-230

Electroosmotic flows with random zeta potential

Gleeson, JP

(2002)
Electroosmotic flows with random zeta potential

* In Journal Of Colloid And Interface Science;*
pp. 217-226

Exact solution for single-scale Gaussian random transport

Gleeson, JP

(2002)
Exact solution for single-scale Gaussian random transport

* In Physical Review E;*
pp. 037103-

[ULIR]

Comment on Diffusion in biased turbulence""

Gleeson, JP

(2002)
Comment on Diffusion in biased turbulence""

* In Physical Review E;*
pp. 038301-

[ULIR]

Spectral viscosity for shallow water equations in spherical geometry

Gelb, A; Gleeson, JP

(2001)
Spectral viscosity for shallow water equations in spherical geometry

* In Monthly Weather Review;*
pp. 2346-2360

A closure method for random advection of a passive scalar

Gleeson, JP

(2000)
A closure method for random advection of a passive scalar

* In Physics Of Fluids;*
pp. 1472-1484

#### Conference Publications

Studies in Computational Intelligence

Melnik S., Gleeson J.P.

(2009)
Studies in Computational Intelligence

* In Studies In Computational Intelligence;*
pp. 147-159

**DOI:** 10.1007/978-3-642-01206-8_13

#### Articles

Emergence of coexisting percolating clusters in networks

Faqeeh, A; Melnik, S; Gleeson, JP; Colomer-de-Sim'on, P

(2015)
Emergence of coexisting percolating clusters in networks

* In arXiv:1508.05590;*