### Biography

James Gleeson holds a BSc in Mathematical Science and an MSc in Mathematical Physics from University College Dublin. In 1999 he completed his PhD in Applied Mathematics at Caltech. He has lectured at Arizona State University and at University College Cork, and since 2007 has held a Chair in Industrial and Applied Mathematics at the University of Limerick.

James' research interests are in mathematical modelling of stochastic dynamics, with a particular focus on complex systems and networks. He is a SEES co-PI, has held three Principal Investigator awards from Science Foundation Ireland, and is a co-PI on a Future and Emerging Technologies project funded by the European Commission's FP7. James is co-director of MACSI, the Mathematics Applications Consortium for Science and Industry (http://www.macsi.ul.ie/). MACSI researchers develop and apply mathematical techniques to assist collaborators from science and industry in solving real-world problems.

### Research Interests

My group works on mathematical models for stochastic dynamics, particularly on complex networks. As co-director of MACSI, I am also interested in applying mathematical tools and techniques to solving real-world problems, in collaboration with partners from industry, science and engineering. Our research is funded by Science Foundation Ireland and, as part of the PLEXMATH project, by the FET-Proactive scheme of the European Commission's FP7. My Google Scholar page is here.

### Publications

#### Book

Dynamical Systems on Networks: A Tutorial

Mason A. Porter and James P. Gleeson

#### Book Chapter

Message-Passing Methods for Complex Contagions

Gleeson, JP;Porter, MA

*COMPLEX SPREADING PHENOMENA IN SOCIAL SYSTEMS: INFLUENCE AND CONTAGION IN REAL-WORLD SOCIAL NETWORKS*
**DOI:** 10.1007/978-3-319-77332-2_5

Systemic Risk in Banking Networks Without Monte Carlo Simulation

James P. Gleeson, T.R. Hurd, Sergey Melnik, Adam Hackett

*Advances in Network Analysis and its Applications*
**DOI:** 10.1007/978-3-642-30904-5

#### Conference Publication

Studies in Computational Intelligence

Melnik S., Gleeson J.P.

*Studies In Computational Intelligence*
**DOI:** 10.1007/978-3-642-01206-8_13

#### Other Publication

Emergence of coexisting percolating clusters in networks

Faqeeh, A; Melnik, S; Gleeson, JP; Colomer-de-Sim'on, P

*arXiv:1508.05590*

#### Peer Reviewed Journal

Multistate Dynamical Processes on Networks: Analysis through Degree-Based Approximation Frameworks

Fennell, PG;Gleeson, JP

*Siam Review*
**DOI:** 10.1137/16M1109345

Sparse Power-Law Network Model for Reliable Statistical Predictions Based on Sampled Data

Kartun-Giles, AP;Krioukov, D;Gleeson, JP;Moreno, Y;Bianconi, G

*Entropy*
**DOI:** 10.3390/e20040257

Integrating sentiment and social structure to determine preference alignments: the Irish Marriage Referendum

O'Sullivan, DJP,Garduno-Hernandez, G,Gleeson, JP,Beguerisse-Diaz, M

*Royal Society Open Science*
**DOI:** 10.1098/rsos.170154

Specifying An Efficient Renewable Energy Feed-in Tariff

Farrell, N,Devine, MT,Lee, WT,Gleeson, JP,Lyons, S

*Energy Journal*
**DOI:** 10.5547/01956574.38.2.nfar

Concurrency-Induced Transitions in Epidemic Dynamics on Temporal Networks

Onaga, T,Gleeson, JP,Masuda, N

*Physical Review Letters*
**DOI:** 10.1103/PhysRevLett.119.108301

Temporal profiles of avalanches on networks

Gleeson, JP,Durrett, R

*Nature Communications*
**DOI:** 10.1038/s41467-017-01212-0

A framework for analyzing contagion in assortative banking networks

Hurd, TR,Gleeson, JP,Melnik, S

*Plos One*
**DOI:** 10.1371/journal.pone.0170579

Equivalence between Non-Markovian and Markovian Dynamics in Epidemic Spreading Processes

Starnini, M,Gleeson, JP,Boguna, M

*Physical Review Letters*
**DOI:** 10.1103/PhysRevLett.118.128301

Emergence of coexisting percolating clusters in networks

Faqeeh, A,Melnik, S,Colomer-de-Simon, P,Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.93.062308

Effects of Network Structure, Competition and Memory Time on Social Spreading Phenomena

Gleeson, JP,O'Sullivan, KP,Banos, RA,Moreno, Y

*Physical Review X*
**DOI:** 10.1103/PhysRevX.6.021019

Emergence of coexisting percolating clusters in networks

Faqeeh, A; Melnik, S; Colomer-de-Simón, P; Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.93.062308

Bond Percolation on Multiplex Networks

Hackett, A,Cellai, D,Gomez, S,Arenas, A,Gleeson, JP

*Physical Review X*
**DOI:** 10.1103/PhysRevX.6.021002

Limitations of discrete-time approaches to continuous-time contagion dynamics

Fennell, PG,Melnik, S,Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.94.052125

Mathematical modeling of complex contagion on clustered networks

O'Sullivan, DJP,O'Keeffe, GJ,Fennell, PG,Gleeson, JP

*Frontiers In Physics*
**DOI:** 10.3389/fphy.2015.00071

Analytical approach to the dynamics of facilitated spin models on random networks

Fennell, PG,Gleeson, JP,Cellai, D

*Physical Review E*
**DOI:** 10.1103/PhysRevE.90.032824

A simple generative model of collective online behavior

Gleeson, JP,Cellai, D,Onnela, JP,Porter, MA,Reed-Tsochas, F

*Proceedings of the National Academy of Sciences of the United States of America*
**DOI:** 10.1073/pnas.1313895111

Dynamics on modular networks with heterogeneous correlations

Melnik, S,Porter, MA,Mucha, PJ,Gleeson, JP

*Chaos*
**DOI:** 10.1063/1.4869983

Competition-Induced Criticality in a Model of Meme Popularity

Gleeson, JP,Ward, JA,O'Sullivan, KP,Lee, WT

*Physical Review Letters*
**DOI:** 10.1103/PhysRevLett.112.048701

A Rolling Optimisation Model of the UK Natural Gas Market

Devine, MT,Gleeson, JP,Kinsella, J,Ramsey, DM

*Networks & Spatial Economics*
**DOI:** 10.1007/s11067-013-9216-4

Binary-State Dynamics on Complex Networks: Pair Approximation and Beyond

Gleeson, JP

*Physical Review X*
**DOI:** 10.1103/PhysRevX.3.021004

Variability in output torque of capstan and wrap spring elements

Cronin, K,Gleeson, JP

*Mechanism And Machine Theory*
**DOI:** 10.1016/j.mechmachthecny.2013.04.014

Percolation in multiplex networks with overlap

Cellai, D,Lopez, E,Zhou, J,Gleeson, JP,Bianconi, G

*Physical Review E*
**DOI:** 10.1103/PhysRevE.88.052811

Cascades on clique-based graphs

Hackett, A,Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.87.062801

Multi-stage complex contagions

Melnik, S,Ward, JA,Gleeson, JP,Porter, MA

*Chaos*
**DOI:** 10.1063/1.4790836

Critical phenomena in heterogeneous k-core percolation

Cellai, D,Lawlor, A,Dawson, KA,Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.87.022134

Accuracy of mean-field theory for dynamics on real-world networks

Gleeson, JP,Melnik, S,Ward, JA,Porter, MA,Mucha, PJ

*Physical Review E*
**DOI:** 10.1103/PhysRevE.85.026106

Statistical characterisation and modelling of random geometric imperfections in cylindrical shells

de Paor, C,Cronin, K,Gleeson, JP,Kelliher, D

*Thin-Walled Structures*
**DOI:** 10.1016/j.tws.2012.04.004

Graph fission in an evolving voter model

Durrett, R,Gleeson, JP,Lloyd, AL,Mucha, PJ,Shi, F,Sivakoff, D,Socolar, JES,Varghese, C

*Proceedings Of The National Academy Of Sciences Of The United States Of America*
**DOI:** 10.1073/pnas.1200709109

High-Accuracy Approximation of Binary-State Dynamics on Networks

Gleeson, JP

*Physical Review Letters*
**DOI:** 10.1103/PhysRevLett.107.068701

Cascades on a class of clustered random networks

Hackett, A; Melnik, S; Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.83.056107

The unreasonable effectiveness of tree-based theory for networks with clustering

Melnik, S; Hackett, A; Porter, MA; Mucha, PJ; Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.83.036112

Tricritical Point in Heterogeneous k-Core Percolation

Cellai, D; Lawlor, A; Dawson, KA; Gleeson, JP

*Physical Review Letters*
**DOI:** 10.1103/PhysRevLett.107.175703

How clustering affects the bond percolation threshold in complex networks

Gleeson, JP; Melnik, S; Hackett, A

*Physical Review E*
**DOI:** 10.1103/PhysRevE.81.066114

Binary Phase Detector Gain in Bang-Bang Phase-Locked Loops With DCO Jitter

Tertinek, S; Gleeson, JP; Feely, O

*Ieee Transactions On Circuits And Systems Ii-Express Briefs*
**DOI:** 10.1109/TCSII.2010.2083110

Statistical Analysis of First-Order Bang-Bang Phase-Locked Loops Using Sign-Dependent Random-Walk Theory

Tertinek, S; Gleeson, JP; Feely, O

*Ieee Transactions On Circuits And Systems I-Regular Papers*
**DOI:** 10.1109/TCSI.2010.2043016

Transport in randomly-fluctuating spatially-periodic potentials

Gleeson, JP

*Physica A-Statistical Mechanics And Its Applications*
**DOI:** 10.1016/j.physa.2008.10.013

Accuracy of whole-body low-dose multidetector CT (WBLDCT) versus skeletal survey in the detection of myelomatous lesions, and correlation of disease distribution with whole-body MRI (WBMRI)

Gleeson, TG; Moriarty, J; Shortt, CP; Gleeson, JP; Fitzpatrick, P; Byrne, B; McHugh, J; O'Connell, M; O'Gorman, P; Eustace, SJ

*Skeletal Radiology*
**DOI:** 10.1007/s00256-008-0607-4

Bond percolation on a class of clustered random networks

Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.80.036107

Study on the Combined Effects of Solvent Evaporation and Polymer Flow upon Block Copolymer Self-Assembly and Alignment on Topographic Patterns

Fitzgerald, TG; Farrell, RA; Petkov, N; Bolger, CT; Shaw, MT; Charpin, JPF; Gleeson, JP; Holmes, JD; Morris, MA

*Langmuir*
**DOI:** 10.1021/la9018162

On asymptotic stability and instability with respect to a fading stochastic perturbation

Appleby, JAD; Gleeson, JP; Rodkina, A

*Applicable Analysis*
**DOI:** 10.1080/00036810902913847

Diffusion coefficient in periodic and random potentials

Khoury, M; Gleeson, JP; Sancho, JM; Lacasta, AM; Lindenberg, K

*Physical Review E*
**DOI:** 10.1103/PhysRevE.80.021123

Analytical results for bond percolation and k-core sizes on clustered networks

Gleeson, JP; Melnik, S

*Physical Review E*
**DOI:** 10.1103/PhysRevE.80.046121

Mean size of avalanches on directed random networks with arbitrary degree distributions

Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.77.057101

Cascades on correlated and modular random networks

Gleeson, JP

*Physical Review E*
**DOI:** 10.1103/PhysRevE.77.046117

Phase diffusion coefficient for oscillators perturbed by colored noise

O'Doherty, F; Gleeson, JP

*Ieee Transactions On Circuits And Systems-Part 11*

Fabrication of nanopore array electrodes by focused ion beam milling

Lanyon; YH; De Marzi, G; Watson, YE; Gleeson, JP; et al

*Analytical Chemistry*

Seed size strongly affects cascades on random networks

Gleeson, JP; Cahalane, DJ

*Phys. Rev. E.*

Kramers' law for a bistable system with time-delayed noise

Goulding, D; Melnik, S; Curtin, D; Gleeson, JP; et al

*Physical Review E*

Non-Lorentzian spectral lineshapes near a Hopf bifurcation

Gleeson, JP; O'Doherty, F

*S.I.A.M. Journal Of Applied Mathematics*

Role of interaction on noise-induced transport of two coupled particles in Brownian ratchet devices

Retkute, R; Gleeson, JP

*Fluctuation And Noise Letters*

Applications of small-world network theory in alcohol epidemiology

Braun, RJ; Wilson, RA; Pelesko, JA; Gleeson, JP; et al

*Journal Of Studies On Alcohol*

The mean field of weakly coupled oscillators exhibits non-smooth phase noise

Gleeson, JP

*Europhysics Letters*

Analytical approach to sorting in periodic and random potentials

Gleeson, JP; Sancho, JM; Lacasta, AM; et al

*Physical Review E*

Phase diffusion due to low-frequency colored noise

Gleeson, JP

*Ieee Transactions On Circuits And Systems-Part 11*

Passive motion in dynamical disorder as a model for stock market prices

Gleeson, JP

*Physica A*

Exactly solvable model of continuous stationary 1/f noise

Gleeson, JP

*Physical Review E*

Transient micromixing: Examples of laminar and chaotic stirring

Gleeson, JP

*Physics Of Fluids*

Influence of noise intensity on the spectrum of an oscillator

Swain, RS; Gleeson, JP; Kennedy, MP

*Ieee Transactions On Circuits And Systems-Part 11*

Nonlinear sloshing and passage through resonance in a shallow water tank

Cox, EA; Gleeson, JP; Mortell, MP

*Zamp*

Modelling annular micromixers

Gleeson, JP; Roche, OM; West, J; et al

*S.I.A.M. Journal Of Applied Mathematics*

Flatness of tracer density profile produced by a point source in turbulence

Gleeson, JP; Pullin, DI

*Physics Of Fluids*

Structuring laminar flows using annular magnetohydrodynamic actuation

West, J; Gleeson, JP; Alderman, J; et al

*Sensors And Actuators B-Chemical*

Exact solution for single-scale Gaussian random transport

Gleeson, JP

*Physical Review E*

Comment on Diffusion in biased turbulence""

Gleeson, JP

*Physical Review E*

Application of magnetohydrodynamic actuation to continuous flow chemistry

West, J; Karamata, B; Lillis, B; Gleeson, JP; et al

*Lab On A Chip*

Electroosmotic flows with random zeta potential

Gleeson, JP

*Journal Of Colloid And Interface Science*

Spectral viscosity for shallow water equations in spherical geometry

Gelb, A; Gleeson, JP

*Monthly Weather Review*

A closure method for random advection of a passive scalar

Gleeson, JP

*Physics Of Fluids*