Biography

I am Chair of Data Science and Statistical Learning in the Dept of Mathematics and Statistics at UL. My research centres on the development of statistical models for large, high-dimensional and complex data that are measured over time (e.g. data measured using sensors, human movement data, etc.) This work is cross-cutting and applicable across a multitude of fields beyond statistics and statistical data science, including industry. I am a Principal/Funded Investigator in several national centres of excellence including Confirm Centre for Smart Manufacturing, Insight Centre for Data Analytics, the Solid State Pharmaceutical Centre (SSPC), the Mathematics Applications Consortium for Science and Industry (MACSI), and am the UL Vice-Director of the SFI Centre for Research Training in Foundations of Data Science. My work has been funded by SFI, Enterprise Ireland, EU (FP7, H2020, Erasmus+) and industry, totalling in excess of €16M. I am currently PI on an SFI Frontiers of the Future grant and am the first of two statistical Ambassadors for the Royal Statistical Society to be based in Ireland.

Research Interests

  • Statistical analysis of time-course/functional data.
  • Smoothing using the mixed effects model.
  • Finite mixture model clustering of time-course data.
  • Modelling -omics data, e.g. RNA-seq data, mass spectrometry data, ChiP-seq data, etc.
  • Biostatistics.
  • Statistical modelling in biomechanics.

Professional Activities

Employment

  • 2021 University of Limerick - Chair of Data Science and Statistical Learning
  • 2020 University of Limerick - Senior Lecturer in Statistics
  • 2017 University of Limerick - Lecturer above the bar in Statistics
  • 2013 University of Limerick - Lecturer below the bar in Statistics
  • 2012 University College Dublin - Lecturer in Statistics
  • 2009 NUI Galway - Postdoctoral researcher
  • 2008 University of Limerick - Junior lecturer in Statistics

Education

  • 2009 University of Limerick - PhD
  • 2005 University of Limerick - BSc (Hons)

Award

  • 2007 - Best postgraduate student presentation at the Conference for Applied Statistics in Ireland
  • 2005 - Silver Medal
  • 2005 - Advanced Scholar Award
  • 2005 - Models for Functional Data Analysis of a Longitudinal Design
  • 2004 - Hamilton Prize
  • 2001 - University of Limerick High Achiever's Award

Association

  • Executive Member, Irish Statistical Association
  • Member, Royal Statistical Society

Other

  • Lean/DFSS certification covering all topics required by Six Sigma Green Belts and the basic Lean principles
  • Reviewer for Statistics in Medicine, the Journal of Classification, the International Journal of Biostatistics, Human Movement Science, Statistics and Computing, Computational Statistics and Data Analysis.

  • Invited speaker at the summer meeting of the British and Irish region of the International Biometric Society, NUI Galway, 10th June 2011
  • Invited speaker at the summer meeting of the British and Irish region of the International Biometric Society, Medway Park, Gillingham, UK, 20th June 2012
  • Seminar speaker, School of Mathematics, Statistics & Applied Mathematics seminar series, NUI Galway, 27th January 2011
  • Seminar speaker, Bioinformatics seminar series, NUI Galway, 25th May 2011
  • Seminar speaker, Department of Mathematics and Statistics seminar series, NUI Maynooth, 7th December 2012
  • Seminar speaker, School of Mathematical Sciences seminar series, UCD, 13th February 2014
    • Speaker at the Women in Mathematics Day, Ireland at NUI, Galway, 1st May 2014.
    • Volunteer for Special Olympics Ireland, 2014

    Consultancy

    • Clinical Research Facility, Galway -
    • Statistical Consulting Unit, UL -

    Committee

    • Irish Statistical Association,
    • Dept Athena Swan Committee,
    • UL Athena Swan Committee,
    • UL40 Mature Student Scholarship Committee,
    • Organising Committee Conference on Applied Statistics in Ireland,
    • External Advisory Board Mathsys CDT Warwick,
    • External Examiner NUI Galway,

    Peer Reviewed Journals

    2022

    Calibrating COVID-19 susceptible-exposed-infected-removed models with time-varying effectivecontact rates

    Gleeson, JP;Murphy, TB;O'Brien, JD;Friel, N;Bargary, N;O'Sullivan, DJP (2022) Calibrating COVID-19 susceptible-exposed-infected-removed models with time-varying effectivecontact rates. LONDON : ROYAL SOC Philosophical Transactions: Mathematical, Physical And Engineering Sciences

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    2021

    PCA of waveforms and functional PCA: A primer for biomechanics

    Warmenhoven, J;Bargary, N;Liebl, D;Harrison, A;Robinson, MA;Gunning, E;Hooker, G (2021) PCA of waveforms and functional PCA: A primer for biomechanics. OXFORD : ELSEVIER SCI LTD Journal of biomechanics

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    2021

    Identifying the gaps in Irish cancer care: Patient, public and providers' perspectives.

    Kelly D;Casey M;Beattie McKenna F;McCarthy M;Kiely P;Twomey F;Glynn L;Bargary N;Leddin D; (2021) Identifying the gaps in Irish cancer care: Patient, public and providers' perspectives.. Health Policy

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    2021

    Understanding the Challenges and Uncertainties of Seroprevalence Studies for SARS-CoV-2.

    McConnell D;Hickey C;Bargary N;Trela-Larsen L;Walsh C;Barry M;Adams R; (2021) Understanding the Challenges and Uncertainties of Seroprevalence Studies for SARS-CoV-2.. International Journal Of Environmental Research And Public Health

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    2019

    Cognitive functional therapy compared with a group-based exercise and education intervention for chronic low back pain: A multicentre randomised controlled trial (RCT)

    O'Keeffe M.;O'Sullivan P.;Purtill H.;Bargary N.;O'Sullivan K. (2019) Cognitive functional therapy compared with a group-based exercise and education intervention for chronic low back pain: A multicentre randomised controlled trial (RCT). British journal of sports medicine

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    2019

    Pupillometry During Golf Putting: A New Window on the Cognitive Mechanisms Underlying Quiet Eye

    Campbell, MJ;Moran, AP;Bargary, N;Surmon, S;Bressan, L;Kenny, IC (2019) Pupillometry During Golf Putting: A New Window on the Cognitive Mechanisms Underlying Quiet Eye. WASHINGTON : AMER PSYCHOLOGICAL ASSOC Sport, Exercise and Performance Psychology :53-62

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    2019

    Bivariate functional principal components analysis: considerations for use with multivariate movement signatures in sports biomechanics

    Warmenhoven, J;Cobley, S;Draper, C;Harrison, A;Bargary, N;Smith, R (2019) Bivariate functional principal components analysis: considerations for use with multivariate movement signatures in sports biomechanics. ABINGDON : ROUTLEDGE JOURNALS, TAYLOR & FRANCIS LTD Sports Biomechanics :10-27

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    2019

    Dance exposure, general health, sleep and injury in elite adolescent Irish dancers: A prospective study

    Cahalan R.;Bargary N.;O'Sullivan K. (2019) Dance exposure, general health, sleep and injury in elite adolescent Irish dancers: A prospective study. Physical Therapy In Sport :153-159

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    2019

    Considerations for the use of functional principal components analysis in sports biomechanics: examples from on-water rowing

    Warmenhoven J.;Cobley S.;Draper C.;Harrison A.;Bargary N.;Smith R. (2019) Considerations for the use of functional principal components analysis in sports biomechanics: examples from on-water rowing. Sports Biomechanics :317-341

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    2019

    Use of ordinary cokriging with magnetic susceptibility for mapping lead concentrations in soils of an urban contaminated site

    Golden N.;Zhang C.;Potito A.;Gibson P.;Bargary N.;Morrison L. (2019) Use of ordinary cokriging with magnetic susceptibility for mapping lead concentrations in soils of an urban contaminated site. Journal Of Soils And Sediments

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    2018

    Force coordination strategies in on-water single sculling: Are asymmetries related to better rowing performance?

    Warmenhoven, J,Smith, R,Draper, C,Harrison, AJ,Bargary, N,Cobley, S (2018) Force coordination strategies in on-water single sculling: Are asymmetries related to better rowing performance?. Scandinavian Journal Of Medicine & Science In Sports :1379-1388

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    2018

    A force profile analysis comparison between functional data analysis, statistical parametric mapping and statistical non-parametric mapping in on-water single sculling

    Warmenhoven, J;Harrison, A;Robinson, MA;Vanrenterghem, J;Bargary, N;Smith, R;Cobley, S;Draper, C;Donnelly, C;Pataky, T (2018) A force profile analysis comparison between functional data analysis, statistical parametric mapping and statistical non-parametric mapping in on-water single sculling. OXFORD : ELSEVIER SCI LTD Journal Of Science And Medicine In Sport :1100-1105

    Read more
    2018

    Understanding the relationship between duration of untreated psychosis and outcomes: A statistical perspective

    Hannigan, A;Bargary, N;Kinsella, A;Clarke, M (2018) Understanding the relationship between duration of untreated psychosis and outcomes: A statistical perspective. HOBOKEN : WILEY Early Intervention In Psychiatry :730-733

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    2018

    How gender and boat-side affect shape characteristics of force-angle profiles in single sculling: Insights from functional data analysis

    Warmenhoven, J;Cobley, S;Draper, C;Harrison, A;Bargary, N;Smith, R (2018) How gender and boat-side affect shape characteristics of force-angle profiles in single sculling: Insights from functional data analysis. OXFORD : ELSEVIER SCI LTD Journal Of Science And Medicine In Sport :533-537

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    2018

    Pain and Injury in Elite Adolescent Irish Dancers: A Cross-Sectional Study.

    Cahalan R;Bargary N;O'Sullivan K; (2018) Pain and Injury in Elite Adolescent Irish Dancers: A Cross-Sectional Study.. Journal of Dance Medicine and Science

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    2018

    Arsenic in Groundwater in South West Ireland: Occurrence, Controls, and Hydrochemistry

    McGrory, E;Holian, E;Alvarez-Iglesias, A;Bargary, N;McGillicuddy, EJ;Henry, T;Daly, E;Morrison, L (2018) Arsenic in Groundwater in South West Ireland: Occurrence, Controls, and Hydrochemistry. LAUSANNE : FRONTIERS MEDIA SA Frontiers In Environmental Science

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    2017

    Impact of grass cover on the magnetic susceptibility measurements for assessing metal contamination in urban topsoil

    Golden, N,Zhang, CS,Potito, AP,Gibson, PJ,Bargary, N,Morrison, L (2017) Impact of grass cover on the magnetic susceptibility measurements for assessing metal contamination in urban topsoil. Environmental Research :294-306

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    2017

    Arsenic contamination of drinking water in Ireland: A spatial analysis of occurrence and potential risk

    McGrory, ER,Brown, C,Bargary, N,Williams, NH,Mannix, A,Zhang, CS,Henry, T,Daly, E,Nicholas, S,Petrunic, BM,Lee, M,Morrison, L (2017) Arsenic contamination of drinking water in Ireland: A spatial analysis of occurrence and potential risk. The Science of the total environment :1863-1875

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    2017

    Assessment of propulsive pin force and oar angle time-series using functional data analysis in on-water rowing

    Warmenhoven, J,Cobley, S,Draper, C,Harrison, AJ,Bargary, N,Smith, R (2017) Assessment of propulsive pin force and oar angle time-series using functional data analysis in on-water rowing. Scandinavian Journal Of Medicine & Science In Sports :1688-1696

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    2016

    Individualised cognitive functional therapy compared with a combined exercise and pain education class for patients with non-specific chronic low back pain: A multicentre randomised controlled trial

    M O'Keeffe, H Purtill, N Kennedy, P O'Sullivan, W Dankaerts, A Tighe, L Allworthy, L Dolan, N Bargary, K O'Sullivan (2016) Individualised cognitive functional therapy compared with a combined exercise and pain education class for patients with non-specific chronic low back pain: A multicentre randomised controlled trial. Manual therapy :e79-e80

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    2016

    Inability to perform because of pain/injury in elite adult I rish dance: A prospective investigation of contributing factors

    Cahalan, R and O'Sullivan, Peter and Purtill, H and Bargary, N and Ni Bhriain, O and O'Sullivan, K (2016) Inability to perform because of pain/injury in elite adult I rish dance: A prospective investigation of contributing factors. Scandinavian journal of medicine & science in sports :694-702

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    2015

    Inability to perform due to pain/injury in elite adult Irish dance: A prospective investigation of contributing factors

    Cahalan, R., O'Sullivan, K., Purtill, H. Bargary N., Ni Bhriain O. and O'Sullivan, P (2015) Inability to perform due to pain/injury in elite adult Irish dance: A prospective investigation of contributing factors. Scandinavian J. Medicine And Science In Sport

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    2015

    Individualised Cognitive Functional Therapy compared with a combined exercise and pain education class for patients with non-specific chronic low back pain: study protocol for a multi-centre randomised controlled trial

    O'Keeffe, M., Purtill, H., Kennedy, N, O'Sullivan, P, Dankaerts, W, Tighe, A, Allworthy L, Dolan L, Bargary N. and O'Sullivan, K. (2015) Individualised Cognitive Functional Therapy compared with a combined exercise and pain education class for patients with non-specific chronic low back pain: study protocol for a multi-centre randomised controlled trial. BMJ open :e007156-

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    2015

    Inability to perform due to musculoskeletal pain and injury in elite adult Irish dancers: a prospective investigation of contributing factors

    Cahalan, R., O'Sullivan, K., Purtill, H., Bargary, N., Ni Bhriain, O, and O'Sullivan, P. (2015) Inability to perform due to musculoskeletal pain and injury in elite adult Irish dancers: a prospective investigation of contributing factors. Physiotherapy :193-194

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    2014

    A prospective observational study of techniques to remove corneal foreign body in the Emergency Department.

    Quirke, M., Mullarkey, C., Coffey, N., O'Donnell, J. and Binchy, J. (2014) A prospective observational study of techniques to remove corneal foreign body in the Emergency Department.. Emergency Medicine Journal :463-466

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    2014

    Clustering longitudinal profiles using P-splines and mixed models applied to time-course gene expression data.

    Coffey, N., Hinde, J. and Holian, E. (2014) Clustering longitudinal profiles using P-splines and mixed models applied to time-course gene expression data.. Computational Statistics & Data Analysis :14-29

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    2013

    Group follow-up compared to individual clinic visits after structured education for type 1 diabetes: a cluster randomised controlled trial.

    Dinneen, S.F., O'Hara, M.C., Byrne, M., Smith, D., Courtney, C.H., McGurk, C., Heller, S., Newell, J., Coffey, N., Breen, C., O'Scannail, M. and O'Shea, D. (2013) Group follow-up compared to individual clinic visits after structured education for type 1 diabetes: a cluster randomised controlled trial.. Diabetes Research And Clinical Practice :29-38

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    2013

    Quality of life gains among people with type 1 diabetes following DAFNE.

    Byrne, M., Newell, J., Coffey, N, O'Hara, M.C., Cooke, D. and Dinneen, S.F. (2013) Quality of life gains among people with type 1 diabetes following DAFNE.. Psychology & Health

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    2012

    Effects of structured education among individuals with type 1 diabetes who experience episodes of severe hypoglycaemia in Ireland.

    Rahmani, G.S., O'Hara, M.C., Coffey, N., Newell, J. and Dinneen, S.F. (2012) Effects of structured education among individuals with type 1 diabetes who experience episodes of severe hypoglycaemia in Ireland.. Irish Journal Of Medical Science

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    2012

    Predictors of quality of life gains among people with type 1 diabetes participating in the Dose Adjustment for Normal Eating (DAFNE) structured education programme.

    Byrne, M., Newell, J., Coffey, N., O'Hara, M. C., Cooke, D. and Dinneen, S.F. (2012) Predictors of quality of life gains among people with type 1 diabetes participating in the Dose Adjustment for Normal Eating (DAFNE) structured education programme.. Diabetes Research And Clinical Practice :243-248

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    2011

    Group follow-up compared to individual clinic follow-up after structured education for type 1 diabetes: The Irish DAFNE Study.

    Dinneen, S.F., O'Hara, M.C., Newell, J., Coffey, N., O'Shea, D., Smith, D., Courtney, H., McGurk, C., O'Scannáil, M., Breen, C. (2011) Group follow-up compared to individual clinic follow-up after structured education for type 1 diabetes: The Irish DAFNE Study.. Diabetologia

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    2011

    Comparing the effect of 2 different methods of follow-up after structured group education on psychosocial measures in patients with type 1 diabetes: the Irish DAFNE Study.

    O'Hara, M.C., Dinneen, S.F., Newell, J., Coffey, N. and Byrne, M. (2011) Comparing the effect of 2 different methods of follow-up after structured group education on psychosocial measures in patients with type 1 diabetes: the Irish DAFNE Study.. Diabetologia

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    2011

    Comparing the effect of 2 different methods of follow-up after structured education on psychosocial measures in patients with type 1 diabetes: the Irish DAFNE Study.

    Dinneen, S.F., O'Hara, M.C., Newell, J., Coffey, N., O'Shea, D., Smith, D., Courtney, H., McGurk, C., O'Scannáil, M., Breen, C. and Byrne, M. (2011) Comparing the effect of 2 different methods of follow-up after structured education on psychosocial measures in patients with type 1 diabetes: the Irish DAFNE Study.. Irish Journal Of Medical Science

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    2011

    The effect of breast cancer awareness month on internet search activity – a comparison with awareness campaigns for lung and prostate cancer.

    Glynn, R. W., Kelly, J. C., Coffey, N., Sweeney, K. J. And Kerin, M. J. (2011) The effect of breast cancer awareness month on internet search activity – a comparison with awareness campaigns for lung and prostate cancer.. Bmc Cancer

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    2011

    Common functional principal components analysis: A new approach to analyzing human movement data

    Coffey, N; Harrison, AJ; Donoghue, OA; Hayes, K (2011) Common functional principal components analysis: A new approach to analyzing human movement data. Human Movement Science :1144-1166

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    2011

    Analyzing time-course microarray data using functional data analysis - a review.

    Coffey, N., Hinde, J. (2011) Analyzing time-course microarray data using functional data analysis - a review.. Statistical Applications In Genetics And Molecular Biology

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    2010

    O-81 The impact of caseload on practice patterns in breast cancer: Evidence from the UK Breast Screening Programme.

    Glynn, R. W., Marshall, N., Coffey, N., Kearins, O., Lawrence, G., Bishop, H. and Kerin, M. J. (2010) O-81 The impact of caseload on practice patterns in breast cancer: Evidence from the UK Breast Screening Programme.. European Journal Of Cancer :31-

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    2008

    Functional data analysis of running kinematics in chronic Achilles tendon injury

    Donoghue, OA; Harrison, AJ; Coffey, N; Hayes, K (2008) Functional data analysis of running kinematics in chronic Achilles tendon injury. Medicine And Science In Sports And Exercise :1323-1335

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    2008

    Functional data analysis of the kinematcis of running gait in subjects with chronic Achilles tendon injury

    Donoghue, OA; Harrison, AJ; Coffey, N; Hayes, K (2008) Functional data analysis of the kinematcis of running gait in subjects with chronic Achilles tendon injury. Medicine And Science In Sports And Exercise :1323-1335

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    2007

    A note on the use of outlier criteria in Ontario laboratory quality control schemes.

    Hayes, K., Kinsella, A., and Coffey, N. (2007) A note on the use of outlier criteria in Ontario laboratory quality control schemes.. Clinical Biochemistry :147-152

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    Books

    This author has not written any publications of this type yet.

    Book Chapters

    2014

    Finite mixture model clustering of SNP data,

    Bargary, N., Hinde, J. and Garcia, A. F. (2014) Finite mixture model clustering of SNP data,. US : Springer Statistical Modelling in Biostatistics and Bioinformatics – Selected Papers

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    2014

    Analysis of Biomechanical Waveform Data

    Deluzio, K. J., Harrison, A. J., Coffey, N., and Caldwell, G.E. (2014) Analysis of Biomechanical Waveform Data. US : Human Kinetics Research Methods in Biomechanics, 2nd Edition

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    Edited Books

    This author has not written any publications of this type yet.

    Other Journals

    This author has not written any publications of this type yet.

    Conference Publications

    2016

    2016 World Scientific Congress of Golf VII

    Campbell, M.J., Moran, A., Bargary, N., Surmon, S., Bressan, L. & Kenny, I.C. (2016) 2016 World Scientific Congress of Golf VII.

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    2016

    2016 World Scientific Congress of Golf VII

    Campbell, MJ; Moran, A; Bargary, N; Surmon, S; Bressan, L; Kenny, IC; (2016) 2016 World Scientific Congress of Golf VII.

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    2015

    33rd Conference of the International Society of Biomechanics in Sports

    Smith, R.M., Warmenhoven, J., Draper, C., Cobley, S., Harrison, A. and Bargary, N. (2015) 33rd Conference of the International Society of Biomechanics in Sports. :1294-1297

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    2014

    Coordinating Group on Environmental Radioactivity (COGER 2014)

    L. Morrison, L. McKitterick, L., Currivan, C.A. McMahon, N. Bargary, M. O'Colmain, M. Hayes, M.D. Guiry (2014) Coordinating Group on Environmental Radioactivity (COGER 2014) .

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    2009

    27th International Conference on Biomechanics in Sports

    Hamill, J., Van Emmerik, R., Miller, R., O¿Connor, K., Coffey, N. and Harrison, A.J., (2009) 27th International Conference on Biomechanics in Sports. :885-889

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    2008

    23rd International Workshop on Statistical Modelling

    Coffey, N., Hayes, K., Donoghue, O. and Harrison, A.J. (2008) 23rd International Workshop on Statistical Modelling.

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    2006

    23rd International Symposium on Biomechanics in Sport

    Donoghue, O., Harrison, A.J., Hayes, K., Coffey, N. (2006) 23rd International Symposium on Biomechanics in Sport. :175-178

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    Conference Contributions

    This author has not written any publications of this type yet.

    Published Reports

    This author has not written any publications of this type yet.

    Editorials

    2021

    Call to increase statistical collaboration in sports science, sport and exercise medicine and sports physiotherapy

    Sainani, KL;Borg, DN;Caldwell, AR;Butson, ML;Tenan, MS;Vickers, AJ;Vigotsky, AD;Warmenhoven, J;Nguyen, R;Lohse, KR;Knight, EJ;Bargary, N (2021) Call to increase statistical collaboration in sports science, sport and exercise medicine and sports physiotherapy. LONDON : BMJ PUBLISHING GROUP British journal of sports medicine :118-122

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    Book Reviews

    This author has not written any publications of this type yet.

    Other Publications

    2021

    Understanding the challenges and uncertainties of seroprevalence studies for sars-cov-2

    McConnell D.;Hickey C.;Bargary N.;Trela-Larsen L.;Walsh C.;Barry M.;Adams R. (2021) Understanding the challenges and uncertainties of seroprevalence studies for sars-cov-2. International Journal Of Environmental Research And Public Health

    Read more
    2021

    Call to increase statistical collaboration in sports science, sport and exercise medicine and sports physiotherapy

    Sainani, KL;Borg, DN;Caldwell, AR;Butson, ML;Tenan, MS;Vickers, AJ;Vigotsky, AD;Warmenhoven, J;Nguyen, R;Lohse, KR;Knight, EJ;Bargary, N (2021) Call to increase statistical collaboration in sports science, sport and exercise medicine and sports physiotherapy. LONDON : BMJ PUBLISHING GROUP British journal of sports medicine :118-122

    Read more
    2019

    Considerations for the use of functional principal components analysis in sports biomechanics: examples from on-water rowing

    Warmenhoven, J;Cobley, S;Draper, C;Harrison, A;Bargary, N;Smith, R (2019) Considerations for the use of functional principal components analysis in sports biomechanics: examples from on-water rowing. ABINGDON : ROUTLEDGE JOURNALS, TAYLOR & FRANCIS LTD Sports Biomechanics :317-341

    Read more
    2018

    A force profile analysis comparison between functional data analysis, statistical parametric mapping and statistical non-parametric mapping in on-water single sculling

    Warmenhoven J.;Harrison A.;Robinson M.;Vanrenterghem J.;Bargary N.;Smith R.;Cobley S.;Draper C.;Donnelly C.;Pataky T. (2018) A force profile analysis comparison between functional data analysis, statistical parametric mapping and statistical non-parametric mapping in on-water single sculling. Journal Of Science And Medicine In Sport :1100-1105

    Read more
    2017

    Bivariate functional principal components analysis: considerations for use with multivariate movement signatures in sports biomechanics

    Warmenhoven J.;Cobley S.;Draper C.;Harrison A.;Bargary N.;Smith R. (2017) Bivariate functional principal components analysis: considerations for use with multivariate movement signatures in sports biomechanics. Sports Biomechanics :1-18

    Read more
    2007

    A note on the use of outlier criteria in Ontario laboratory quality control schemes

    Hayes, K; Kinsella, A; Coffey, N (2007) A note on the use of outlier criteria in Ontario laboratory quality control schemes. :147-152

    Read more